Skip to content

Introduction to the Command Line and Scripting for Bioinformatics

This course is targeted at researchers in biological and medical sciences wishing to develop their bioinformatics capacity.

Introduction to the Command Line and Scripting For Bioinformatics CaRST Credit 6 hours. A: Knowledge and Intellectual Abilities. Face to Face.


Areas covered will be:

  • Navigating through files and directories
  • Regular Expressions
  • stdout, stderror and re-direction of output
  • sed and awk
  • Writing scripts

Basic job submission to a High Performance Computing (HPC) system

Introduction to the Command Line and Scripting For Bioinformatics
Target Audience All Postgraduate Research Students
CaRST Credit 6 hours
Domain A: Knowledge and Intellectual Abilities
Learning Outcomes A1
Mode of Delivery Face to Face
Pre-requisites None
Resources Not applicable
Provider Bioinformatics Hub
Evidence of Completion Attendance will be recorded online in the University Course Bookings system.
Enquiries Email the Bioinformatics Hub on bioinf_hub@adelaide.edu.au or call 8313 1207
Dates 19th September, 9am to 5pm
Room 422, Horace Lamb Building
Booking Through the University Course Bookings system.

Book Online

Career and Research Skills Training (CaRST) Unit
Address

Adelaide Graduate Centre
Level 2, Schulz Building
THE UNIVERSITY OF ADELAIDE
SA 5005
AUSTRALIA

Contact

T: +61 8 8313 5882
F: +61 8 8313 5725
carst@adelaide.edu.au