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Dental Therapy Library Tutorial

January 2008
Mick Draper

Table of Contents

Identifying Citations: Books Catalogue: Known Articles Library Exercise Text Word Searches
Identifying Citations: Chapters Catalogue: Electronic Journals Articles By Topic Related Articles
Identifying Citations: Articles Guided Keyword Search PubMed: MeSH Displaying Citations
Citing References Guided Keyword: Books MeSH Single Topic Searches Review Articles
Citation Styles Guided Keyword: Topics Combing MeSH Limits
Catalogue: Finding Books Logic Grids MeSH Subheadings Other Resources

Identifying Citations to Books

You can identify a citation to a book by the presence of:

          author(s) or editor(s), date,  book title,
        publisher, and place of publication.

For example:


Identifying Citations to a Chapter in a Book

You can (usually) identify a citation to a chapter in a book by the presence of the word 'in'
before the title of the book, or sometimes before the editor(s) of the book. Here is an example of a citation to a chapter.

Sometimes the in is missing. In such cases you need to carefully note that there is both a chapter title and a book title.

It is important to identify citations to chapters.
When you search for a chapter in The Catalogue, you will almost always need to search for
the book containing the chapter,
not the chapter itself.
Using the example above, you would search The Catalogue for the book title
Experimental neuroanatomy: a practical approach
not the chapter title.

Exception
The only exceptions are chapters on Faculty reading lists:. These chapters may be scanned by The Library and be included in The Catalogue. Such chapters will be listed in The Catalogue by (chapter) title and (chapter) author.

Identifying Citations to Journal Articles

You can identify a journal article by

  • the presence of volume number, issue number, and pagination
  • the absence of the word 'in', name of publisher or place of publication

There may be variations in the citation style:

  • the title of the article may be omitted (usually in the bibliographies of older journal articles or books)
  • the journal title may be abbreviated
  • the volume number may be in bold, plain text, or underlined
  • the issue number may be omitted
  •  

    Citing References

    When you use information from books and journal articles in your essays and other assignments, you must acknowledge this.
    You must give credit to the authors you quote by citing them in a bibliography (list of citations) at the end of your assignment. If you don't do this you commit plagiarism.

    Avoiding Plagiarism by Helene Hipp & Ursula McGowan from the Uni of Adelaide Language and Learning Service

    Citation Styles

    There are many citation styles that can be used for bibliographies. You should always follow the citation style recommended by your teachers. If there is no recommended style you should choose an internationally accepted style.

    Here are some links to styles

    Uniform Requirements for Manuscripts the requirements for presenting articles for publication. From International Committee of Medical Journal Editors.
    The style for bibliographies using URM is called the Vancouver style This version is from Monash Uni Library.

    B Davis Schwartz Memorial Library links to citation styles

    Harvard Style
    University of Leeds version of Harvard style bibliographies and references
    University of South Australia's Referencing using the Harvard author-date system
    Students are often told to use the Harvard Style, but there isn't a single standard version of the Harvard system.

    The Library has some books on the topic of citation styles

    The Chicago manual of style.
    808.02 U58.15

    1 copy in Reference, 1 copy in Main Collection

    Publication manual of the American Psychological Association
    808.06615 A512p.5
    Copies in Reference, Reserve, and Main Collections

    Style manual for authors, editors and printers.
    808.027 A938.5
    Copies in Main Collection and at other campuses
    This covers the Harvard style

    Using the Catalogue to Find Known Books

    Find the book Pediatric dentistry: infancy through adolescence

    Start at the Library Home.
    Click on the Catalogue tab

    Click on the triangle at the end of the box containing Keyword (search engine style)
    Click on
    Title (omit beginning 'The', 'A' etc)


    Type the book title into the Search for box.
    Click on the
    Search button.

    The Catalogue finds 4 editions of this title.
    Click on the 2005 edition.

    This will show you the details of the book, its location and call number.

    Barr Smith Main Collection is on levels 1 and 2 of the building.

    617.645 is the Dewey Decimal number of the book, and
    P655p.4 is an additional number that gives this edition of the book a unique 'Call Number'. Together the book's location and call number give the precise place on the shelves where it's found

    Available means that the book should be in the library.
    If a book is on loan, the due date for it to be returned is displayed.

    Remember not to include THE, A, or AN in your title search if it's the first word of the title.

    A catalogue search for The human cranial sutures in health and disease
    should be entered as
    human cranial sutures in health and disease

    To do a new search click on the New Search button at the top of the catalogue screen.

    Or the New Search link at the bottom of the screen.

    Searching for a Book By the Author or Editor Name
    You can use Author in the catalogue to find a book if you know an author's (or editor's) surname and first initial.

    Click on Author (last name first) in the by box.
    Type in the surname, a space, and first initial in the Search for box
    Click on the Search button.

    Sometimes you'll be taken to an intermediate screen to select your author.

    The library has 2 books by Monty Duggal.
    Click on his name (highlighted in blue) to view the details.

    Click on the link to the book you want to find details of location and call number.


    Using The Catalogue to Find Known Journal Articles

    Use Journal or Newspaper Title search in the by box.
    Enter the
    journal title (e.g. Evidence-based dentistry ) not the article title in the Search for: box.
    Click on the Search button, or press Enter.

    In this case two journal titles appear.
    One is the print form of Evidence-based dentistry, and the other is the electronic version.
    Look at the print version first.

    By looking at Library Has and Recent Issues you should be able to work out that the library has all the issues of this journal from volume 1 1998 to the present.
    Record the call number and note any important location information such as Recent issues shelved in Current journals.

    Finding Electronic Journal Articles

    The second record for the journal Evidence-based dentistry links to the electronic version of this title.
    Let's look for the article

    Yeung, C.A. 2007. Fluoride prevents caries among adults of all ages Evidence-based dentistry 8(3) 72-73.

     

    Guided Keywords Searching

    Finding books using Guided Keyword

    Guided keywords are useful when you know some details of a book but not enough to use title search, or author search.

    Perhaps you know about a book that includes the word hazardous in the title and you think the author's name is Miller but you don't know the author's initial.

    Keyword search will help find the book quickly.
    Click on the Guided Keyword Search button.
    If the screen has returned to the Library home you will have to click on the Catalogue tab again.

    Enter the terms you want to search (in this example hazardous and miller)
    Click on the Search button.

    You can also use Keyword (search engine style) for this sort of search.

    Searching for Topics Using Guided Keyword

    Guided Keyword search is also useful for finding items on a particular topic such as oral diagnosis.
    You can type these words into the Search for box, or you can truncate words using the ? symbol.

    e.g. diagnos?
    This ? at the end of a word stem will cause The Catalogue to search for all words that begin with the letters
    d-i-a-g-n-o-s.
    This is equivalent to searching diagnose OR diagnoses OR diagnosis OR diagnostic OR diagnostically etc

    The two terms oral and diagnos? will be combined by the catalogue using AND logic.
    This means that The Catalogue will find only those items that have both of these terms within their records.

    You can search for these terms as a phrase so that you restrict the search to phrases such as
    oral diagnosis OR oral diagnoses etc.

    Click on the box to the right of the Search for box, that shows all of these as a default.

    Click on as a phrase.

    Click on the Search button.


    Logic Grids

    To make sure that you get your search logic right before beginning to search it's very useful to use a logic grid.
    Write down the main concepts that you want to search.
    Under each concept write down any synonyms or alternative terms.

    A search on oral diagnosis might be placed in a grid like the one below.
    You can use any piece of paper to sort out your logic.

    This will give you columns of words that can be combined using OR logic.

    Logic Grid
    oral diagnos?
    endodont? symptom?
    orthodont? sign?
    periodont?  
    prosthodont?  

    OR logic means that any one or more of several terms can be included in the search results.

    AND logic means that all terms have to be included

    Brackets mean that the operations inside the brackets must be done before operations outside the brackets
    Your search will be

    (oral OR endodont? OR orthodont? OR periodont? OR prosthodont?) AND (diagnos? OR symptom? OR sign?)

    So all the ORs are done first, then the two separate groups of ORed terms are ANDed together. The result will be a group of records that has at least one of the terms from the first column and at least one of the terms from the second column.

    To do this search using Guided Keywords enter all the terms from the first column in one of the Search for: boxes.
    This is a keyword search so don't include the ORs but change all of these to any of these.

    Now put the words from the second column of the logic grid into the second Search for box.
    Remember to change all of these to any of these.
    Click on the Search button, or press the Enter key.

    You can make your searches more specific by limiting searches to particular elements of catalogue records.

    You can find more details on using the catalogue in the Library Health Sciences Tutorial

    Now you should know

    Where to find books and printed journals in the Barr Smith Library
    How to identify books, book chapters, and journal articles in reading lists
    How to use the Library Catalogue to find known items
    How to use Guided Keywords to find items on a particular topic

    Library Exercise

    You can do this exercise in pairs, and show me the results of your work

    Find one of these books on the Library shelves

    Peter W. Lucas Dental functional morphology : how teeth work
    Cambridge : Cambridge University Press, 2004

    Lavelle, C. L.B. 1988. Applied oral physiology 2nd edition.
    London : Wright

    Kishen, A. & Asundi, A. 2007. Fundamentals and applications of biophotonics in dentistry
    London : Imperial College Press

    Palmer, Carole A. (2007) Diet and nutrition in oral health. 2nd Ed Upper Saddle River, N.J. : Pearson

    Brudvik, J.S. Advanced removable partial dentures Chicago : Quintessence Pub. Co., c1999

    ================================================

    Find one of these journal articles in print on the Library shelves

    Cheifetz, A.T. et al (2005) Prevalence of bruxism and associated correlates in children as reported by parents. Journal of dentistry for children 72(2) 67-73

    Ramos-Gomez, F.J. (2000) Oral manifestations and dental status in paediatric HIV infection. International journal of paediatric dentistry 10(1) 3-11.

    Holst, D. et al (2001) Caries in populations - a theoretical, causal approach. European journal of oral science 109(3) 143-148.

    Anya, P.G.F. et al (2005) A visual analog scale for measuring dental fluorosis severity. JADA 136(7) 895-901

    Dunipace, A.J. et al 1997. An in situ interproximal model for studying the effect of fluoride on enamel. Caries research 31(1) 60-70

    ================================================

    Find one of these journal articles in electronic format

    Do L.G., & Spencer A. 2007. Oral health-related quality of life of children by dental caries and fluorosis experience. Journal of public health dentistry 67(3) 132-139

    Almerich-Silla J.M., & Montiel-Company J.M. 2007. Influence of immigration and other factors on caries in 12- and 15-yr-old children. European journal of oral sciences 115(5):378-83.

    D.S. Brennan, A.J. Spencer, and K.F. Roberts-Thomson 2007 Quality of Life and Disability Weights Associated with Periodontal Disease Journal of dental research 86(8) 713-717.

    Annunziata, M. et al 2006. In vitro biological response to a light-cured composite when used for cementation of composite inlays. Dental materials 22(12) 1081-1085

    Senawongse, P. et al 2006. Age-related changes in hardness and modulus of elasticity of dentine. Archives of oral biology 51(6) 457-463

    =====================================================================

    Finding Journal Articles by Topic
    Using PubMed

    PubMed is a database of citations to more than 17 million health and life science journal articles from more than 4,600 of the world's most used journals. The University of Adelaide Library has a customized version of the PubMed Database that provides direct links to some Uni of Adelaide electronic journals. You can use this version of PubMed when you're in the BSL by finding it on

    The Library Home

    The Catalogue

    Databases Tab

    Resource Guides Tab

    Outside the University you can get to PubMed using the url www.pubmed.gov

    MeSH Database

    PubMed has a subject index called the MeSH database. Using MeSH you can find citations to articles on a huge range of topics in PubMed.

    Click on MeSH Database on the left hand side bar to open the MeSH search box.

    PubMed operates efficiently using Medical Subject Headings or MeSH. These subject headings are used to index all articles on a particular topic no matter what terms are used by the author(s) in an article title, and abstract to describe the article's contents.

    Using MeSH to Search for Citations
    Type a term into the MeSH database

    e.g. tooth extraction

    Click on the Go button (or press Enter)

    MeSH database offers

    • a definition of the term
    • subheadings (see later)
    • some limiting methods
    • "entry terms"
    • your term's position in a hierarchy of MeSH

    A MeSH search on a topic will find all citations that have that subject heading, or one of the subject headings indented below it. So a search for tooth extraction will also find citations to articles with the subject heading Serial Extraction.

    To find all the citations in the PubMed database that include the subject heading Tooth Extraction
    Click on Links (found to the right of the subject heading)

    Click on PubMed in the menu that appears.

    The PubMed database will then show all the citations that include this subject heading.

    Clicking on PubMed -Major Topic will restrict the citations found to those where the MeSH Tooth Extraction is a major topic of the article.

    Try a search now looking for Tooth Extraction as a Major MeSH.

    Combining MeSH
    To find citations on Tooth Extraction and Children
    you can combine two subject headings

    Click on the Back arrow or search again for tooth extraction.
    This time click in the box to the left of the subject heading

    A tick will appear.
    Next click on Send to and then click on Search Box with AND from the drop down menu.

    Notice that Tooth Extraction now appears in the PubMed Search box.
    In the MeSH search box clear tooth extraction and enter children.
    Click on the Go button.

    The MeSH for children is Child.
    Click in the box to the left of the subject heading.
    Click on Send to.
    Click on Search Box with AND.

    Now the PubMed search box is set to search for citations of articles that include both subject headings
    Tooth Extraction AND Child
    Click on the PubMed Search button.

    MeSH Subheadings
    You can use subheading to make searches more specific.
    If you want to search for diagnosis of dental decay in children you could use a MeSH search with subheadings.
    Enter your first search term dental decay in the MeSH Database.
    This takes you to the MeSH Dental Caries.
    Click on the link.

    Scroll down to view the subheadings available.
    Click in one or more box to the left of each subheading you want to include in your search.

    Click on Send to.
    Click on Search Box with AND.

    Type child into the MeSH search box and click on Go.
    Click in the box to the left of the subject heading.
    Click on Send to.
    Click on Search Box with AND.
    Click on PubMed Search.


    Text Word Searches

    MeSH searches find the citations that have subject headings added. While this includes almost all citations in PubMed, MeSH searches often exclude citations to the most recently published articles. To overcome this you can search on words that appear in the titles and abstracts of the citations. It is sensible to include both MeSH and keyword (called text words by PubMed) in your searches.

    Logic Grids and PubMed
    It's always useful to write out your search in narrative form and decide on the main concepts.
    It's usually best to write this as an 'answerable question'.

    Do probiotics improve oral health in children and adolescents

    To help you formulate your search it's often useful to use the PICO principle for setting out a logic grid .
    PICO is the acronym for Population, Intervention, Comparison, Outcome
    Write down the main concepts that you want to search for under each of these headings

    To help you search you can construct a grid with the main concepts at the head of a series of columns. You don't always need to include all the aspects mentioned.
    In this search the comparison is no treatment so that can be left out of the search.

    Children Probiotics - Oral Health

    Next think of synonyms, alternative terms, plurals etc. for each of these terms.
    List these new terms underneath your original terms.   
    Plurals, and British/North American spelling variations are worth including in your lists.
    Always try to include at least one MeSH that describes the concept in each column.
    Enclose all phrases that aren't MeSH in double quotes.

    Truncation
    In PubMed the truncation symbol is *,
    it works the same way as ? does in the catalogue.
    Don't use truncation on MeSH, because it will often alter the way subject headings are searched.
    children probiotics oral health
    child probiotic dental caries
    adolescent   ."tooth decay"
    adolescen*   periodontal diseases

    Always try to include at least one MeSH in each column if possible. This ensures that you include in your search all the citations indexed by that subject heading. You don't have to tell PubMed that this term is a MeSH, PubMed will sort that out. Including other non MeSH terms for the concept will help you to find citations to articles that don't have a MeSH.

    When you type your search in the PubMed query box, the terms in each of your columns must be joined by OR logic and enclosed in brackets. The terms from different columns are joined by AND logic. Enclosing the terms from each column in brackets ensures that they are combined using OR logic before the AND logic is used by the PubMed program.

    The search above becomes

    (children OR child OR adolescent OR adolescen*) AND (probiotics OR probiotic) AND (oral health OR dental caries OR "tooth decay" OR periodontal diseases)

    This can be typed in the PubMed query box.

    Notice that the first citation found is "in process".

    This means that the citation doesn't yet have MeSH.

    Related Articles

    PubMed runs a weighted algorithm based on MeSH, title words, and abstract words to find other articles that are similar to those you have found in your search. This will often allow you to find more articles that are about your topic. Just click on the Related Articles link to the right of any citation.


    Citation Display Formats

    Citations found by searches are initially displayed in Summary form.
    This includes

    author(s)
    article title
    abbreviated journal title
    publication details
    a PubMed Identification number
    Stage of indexing

    To change the display format
    click on the black triangle to the right of the Display indicator.

    Point and click on the format that suits you.

    Abstract
    The abstract format includes the summary information and also where available an abstract (summary) of the article.

    Some of these abstracts will have a Uni of Adelaide Online icon. A click on the icon should take you to the full text of the article.
    Not all of the journal articles we have will receive an icon on PubMed. If there is no icon check the journal title in the Library Catalogue. You should be able to find the article if we have it.

    You'll notice that PubMed uses abbreviated journal titles.
    Abbreviated titles may not work in the Catalogue. It's safer to use the full title.
    To find the full title on PubMed, point your cursor at the abbreviated title.
    Don't click, just point.
    The full title will appear (briefly)

    AbstractPlus
    This is the same as Abstract but with the first 5 related articles displayed to the right of the abstract display.

    Review Articles

    Review articles don't present new research results but assess research by several authors in a particular field. Reviews are useful for background information but often express the opinion of a single author. They aren't appropriate for evidence based practice unless they are systematic reviews.

    To view review articles from your searches simply click on the Review tab below the Display box.

    Limits

    Sometimes your search will find more articles than you can cope with. PubMed offers a number of limits.
    Click on the Limits tab.

    Using limits can change the sort of citations you retrieve.
    Some limits will remove many of the most recent citations.
    It's probably safest to limit only to language and date.

    Other Resources

    Library Basic PubMed Tutorial
    This tutorial is based on PubMed's own comprehensive tutorial and goes into more detail

    Official PubMed Tutorial
    This is a detailed tutorial covering all aspects of PubMed

    Barr Smith Library PubMed Tutorial
    This is more detailed than the basic tutorial but not as detailed as the official tutorial

    Barr Smith Library's Introduction to Evidence Based Dentistry
    Covers some of the principles of evidence based practice.

    Barr Smith Library's notes on How to Read an Article
    Basic notes on critically reviewing an article

    Barr Smith Library Dentistry Resource Guide
    A compilation of oral health web resources